miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|68320949|gb|AM019757.1|AM019757 GAGCTTTGGATGAAGCTACCAAGTATGCCCTGGAGAGAAAAACTTTTGGAAAGCTGCTTATAGAGCACCAAGGAATATCA
TTTTTGCTGGCTGAAATGGCAATGAAAGTTGAACTAGCTAGATTGAGTTACCAGAGAGCAGCTTGGGAAGTTGATTCTGG
TCGCCGAAATACCTATTATGCCTCTATTGCAAAGGCATATGCTGGAGATATCGCAAATCAGTTAGCTTCTGATGCTGTTC
AGATTTTTGGAGGCAATGGATTTAATACTGAATATCCTGTAGAAAAATTAATGAGAGATGCCAAGATCTATCAGATTTAT
GAAGGTACAGCACAAATTCAAAGGCTTATTATAGCCCGTGAACACATTGGCAGGTATAAGAAGTAACCAGATCACCGTGT
TAATAATCGTTGAGTAATTAGAATATGATCTACTATTTAAACTCCAGGAAAGAATAAGGGCTTTAAGGGTTTTTTTCCAG
CGAAAATTTTAACATAGGTTCTCATGTACTAAACCTGTGTAACTGATTCTAATAGTATTGGGTTGGCCAAAAAGTTTGTT
TGGGTTTTTTTATAATGTTATGAAAAAACCTGGATGAACTTCTGGGCCAACCCAAGTTTTCTACTTTTGTTTAACTTTAT
GACTTGCCTTTTCTATAACACATTTGGTTTTATTAAAGTTATGTGTTTTCCTTTAGTTCCAGTGTACCTGAATTACATTA
ACCTAGAAAAATACGTTTGGTTTGTTGTTTTAACCTCTGAAAATTAGAGAAACAGAAATTTCTTGGAATTTCAGTGTTTT
TCCAAAGACAGAAAAGAAGGTTTATAAAGTATTCAGAATGTTCCAAATTTACATTGAGAAATATTCTAGGATTTAAATAA
CTTGTCAGTGACTTTGT




Most similar to sp|Q3SZB4|ACADM_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1
          Length = 421

 Score =  251 bits (640), Expect = 6e-66
 Identities = 127/127 (100%), Positives = 127/127 (100%)
 Frame = +3

Query: 3   ALDEATKYALERKTFGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYA 182
           ALDEATKYALERKTFGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYA
Sbjct: 295 ALDEATKYALERKTFGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYA 354

Query: 183 SIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE 362
           SIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE
Sbjct: 355 SIAKAYAGDIANQLASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIARE 414

Query: 363 HIGRYKK 383
           HIGRYKK
Sbjct: 415 HIGRYKK 421